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  5. GRMZM2G121221

GRMZM2G121221


Description : winged-helix DNA-binding transcription factor family protein


Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G121221
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
At2g30620 No alias Histone H1.2 [Source:UniProtKB/Swiss-Prot;Acc:P26569] 0.03 Orthogroups_2024-Update
Bradi1g55260 No alias winged-helix DNA-binding transcription factor family protein 0.04 Orthogroups_2024-Update
Brara.D01833.1 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
Brara.E01274.1 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
Glyma.10G163300 No alias winged-helix DNA-binding transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.20G225900 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G094400.5 No alias linker histone *(H1) 0.04 Orthogroups_2024-Update
HORVU5Hr1G106550.2 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
HORVU5Hr1G106610.2 No alias linker histone *(H1) 0.04 Orthogroups_2024-Update
HORVU5Hr1G106730.2 No alias linker histone *(H1) 0.03 Orthogroups_2024-Update
HORVU7Hr1G012850.1 No alias linker histone *(H1) 0.02 Orthogroups_2024-Update
Kfl00023_0480 kfl00023_0480_v1.1 (p23444|h1_maize : 87.4) Histone H1 - Zea mays (Maize) &... 0.02 Orthogroups_2024-Update
LOC_Os03g58470 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g08710 No alias AT hook-containing DNA-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_102574g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_500183g0010 No alias (original description: no original description) 0.04 Orthogroups_2024-Update
MA_5243726g0010 No alias (p27806|h1_wheat : 91.3) Histone H1 - Triticum aestivum... 0.04 Orthogroups_2024-Update
PSME_00018264-RA No alias (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00053828-RA No alias (original description: no original description) 0.05 Orthogroups_2024-Update
Potri.002G043100 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.005G219800 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Solyc06g084020 No alias histone H1 0.03 Orthogroups_2024-Update
Solyc09g083380 No alias Histone H1 (AHRD V3.3 *-* H1_MAIZE) 0.03 Orthogroups_2024-Update
Sopen09g032300 No alias linker histone H1 and H5 family 0.04 Orthogroups_2024-Update
evm.model.contig_2062.24 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006334 nucleosome assembly IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 50 117
No external refs found!