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Description : RING/U-box superfamily protein
Gene families : OG_42_0000883 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000883_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G122284 | |
| Cluster | HCCA clusters: Cluster_135 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_23909 | No alias | ring-h2 finger protein atl46 | 0.06 | Orthogroups_2024-Update | |
| Bradi1g44990 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g46992 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g37187 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.G01474.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G416216 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
| HORVU7Hr1G027060.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| LOC_Os08g34550 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_10435495g0010 | No alias | (at4g30400 : 213.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00034279-RA | No alias | (at4g30400 : 237.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.018G098500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s82_19V6 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
| Seita.4G045500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.4G101700.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G188200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G241200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G326000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Solyc07g006360 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT4G30400.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen03g033150 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| MF | GO:0051743 | red chlorophyll catabolite reductase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 122 | 165 |
| No external refs found! |