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  5. GRMZM2G122897

GRMZM2G122897


Description : protodermal factor 2


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G122897
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
At5g52170 No alias homeodomain GLABROUS 7 [Source:TAIR;Acc:AT5G52170] 0.02 Orthogroups_2024-Update
Brara.J00342.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G123140 No alias homeobox-7 0.03 Orthogroups_2024-Update
Glyma.12G100100 No alias homeodomain GLABROUS 2 0.03 Orthogroups_2024-Update
Pp1s84_236V6 No alias tpa: tpa_inf: class iv hd-zip protein hdz41 0.02 Orthogroups_2024-Update
Sopen06g015560 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 251 474
IPR001356 Homeobox_dom 45 100
No external refs found!