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  5. GRMZM2G123094

GRMZM2G123094


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G123094
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
At1g14580 No alias C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580] 0.03 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.E02737.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02048.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Glyma.07G009100 No alias indeterminate(ID)-domain 7 0.02 Orthogroups_2024-Update
Glyma.08G056800 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G036710.3 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
PSME_00007148-RA No alias (at3g50700 : 335.0) zinc finger protein, similar to... 0.02 Orthogroups_2024-Update
PSME_00045485-RA No alias (at1g03840 : 315.0) MGP is a nuclear-localized putative... 0.03 Orthogroups_2024-Update
PSME_00054281-RA No alias (at1g03840 : 248.0) MGP is a nuclear-localized putative... 0.02 Orthogroups_2024-Update
Sobic.003G031800.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc06g075250 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.02 Orthogroups_2024-Update
Sopen02g013980 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update
Sopen02g030250 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen04g033710 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen06g028730 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update
Sopen08g018610 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!