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  5. GRMZM2G124371

GRMZM2G124371


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G124371
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
A4A49_08213 No alias ultraviolet-b receptor uvr8 0.03 Orthogroups_2024-Update
Bradi3g51950 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Glyma.03G040800 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Glyma.11G168801 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
LOC_Os04g58960 No alias regulator of chromosome condensation, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001849 PH_domain 13 116
IPR000408 Reg_chr_condens 449 496
IPR000408 Reg_chr_condens 283 330
IPR000408 Reg_chr_condens 388 437
IPR000408 Reg_chr_condens 554 602
IPR000408 Reg_chr_condens 334 385
IPR000408 Reg_chr_condens 501 550
IPR000306 Znf_FYVE 606 672
IPR027988 BRX_N 839 874
IPR013591 Brevis_radix_dom 988 1042
No external refs found!