At1g30810

Description : Lysine-specific demethylase JMJ18 [Source:UniProtKB/Swiss-Prot;Acc:F4I6G4]

Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g30810
Cluster	HCCA clusters: Cluster_195

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU1Hr1G093770.7	No alias	histone demethylase *(PKDM7)	0.03	Orthogroups_2024-Update
Sopen02g018860	No alias	JmjC domain, hydroxylase	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003888	FYrich_N	655	699
IPR004198	Znf_C5HC2	519	571
IPR003889	FYrich_C	706	788
IPR003349	JmjN	60	93
IPR003347	JmjC_dom	294	410

External Links

No external refs found!