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  5. GRMZM2G125954

GRMZM2G125954


Description : F-box and associated interaction domains-containing protein


Gene families : OG_42_0000616 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G125954
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02556 No alias F-box family protein 0.03 Orthogroups_2024-Update
LOC_Os03g46500 No alias OsFBX102 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g46530 No alias OsFBX104 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g41590 No alias expressed protein 0.02 Orthogroups_2024-Update
Seita.8G061900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 39 78
No external refs found!