GRMZM2G126120

Description : RNA-binding KH domain-containing protein

Gene families : OG_42_0000643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G126120
Cluster	HCCA clusters: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.13G062200	No alias	RNA-binding KH domain-containing protein	0.03	Orthogroups_2024-Update
MA_6622g0010	No alias	(at5g46190 : 163.0) RNA-binding KH domain-containing...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
CC	GO:0005643	nuclear pore	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
MF	GO:0017056	structural constituent of nuclear pore	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	366	433
IPR004088	KH_dom_type_1	280	330
IPR004088	KH_dom_type_1	137	204
IPR004088	KH_dom_type_1	40	102

External Links

No external refs found!