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  5. GRMZM2G127299

GRMZM2G127299


Description : bromodomain and extraterminal domain protein 9


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G127299
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At5g46550 No alias Transcription factor GTE12... 0.02 Orthogroups_2024-Update
At5g63320 No alias NPX1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIE5] 0.03 Orthogroups_2024-Update
Bradi2g34827 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Bradi3g47960 No alias bromodomain and extraterminal domain protein 10 0.03 Orthogroups_2024-Update
Glyma.04G193800 No alias nuclear protein X1 0.02 Orthogroups_2024-Update
Glyma.05G045700 No alias nuclear protein X1 0.02 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.05 Orthogroups_2024-Update
Glyma.19G084600 No alias global transcription factor group E8 0.05 Orthogroups_2024-Update
LOC_Os02g38980 No alias bromodomain domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10435152g0020 No alias (at5g63320 : 289.0) Encodes NPX1 (Nuclear Protein X1), a... 0.02 Orthogroups_2024-Update
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Potri.001G285700 No alias global transcription factor group E3 0.02 Orthogroups_2024-Update
Potri.001G355300 No alias DNA-binding bromodomain-containing protein 0.02 Orthogroups_2024-Update
Seita.1G016100.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Seita.2G326000.1 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Seita.6G078100.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Seita.6G200600.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Seita.8G053600.1 No alias transcriptional co-activator *(BET/GTE) 0.04 Orthogroups_2024-Update
Sobic.002G313300.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Sobic.004G205600.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Sobic.007G026000.2 No alias transcriptional co-activator *(BET/GTE) 0.02 Orthogroups_2024-Update
Sobic.010G028300.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
evm.model.contig_2143.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027353 NET_dom 363 424
IPR001487 Bromodomain 173 256
No external refs found!