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  5. GRMZM2G128432

GRMZM2G128432


Description : Primosome PriB/single-strand DNA-binding


Gene families : OG_42_0002038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G128432
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At1g31010 No alias Protein OSB4, chloroplastic... 0.02 Orthogroups_2024-Update
At4g20010 No alias PTAC9 [Source:UniProtKB/TrEMBL;Acc:A0A178UX75] 0.04 Orthogroups_2024-Update
Bradi1g14220 No alias Primosome PriB/single-strand DNA-binding 0.03 Orthogroups_2024-Update
Brara.K01788.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 Orthogroups_2024-Update
Glyma.14G079700 No alias Primosome PriB/single-strand DNA-binding 0.02 Orthogroups_2024-Update
HORVU3Hr1G107020.3 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 Orthogroups_2024-Update
HORVU5Hr1G093650.4 No alias ssDNA-binding protein *(OSB) 0.02 Orthogroups_2024-Update
LOC_Os01g72049 No alias retrotransposon, putative, centromere-specific, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g43420 No alias single-stranded DNA-binding protein, putative, expressed 0.04 Orthogroups_2024-Update
Potri.001G394200 No alias plastid transcriptionally active 9 0.02 Orthogroups_2024-Update
Seita.5G451200.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 Orthogroups_2024-Update
Seita.9G162700.1 No alias ssDNA-binding protein *(OSB) 0.02 Orthogroups_2024-Update
Solyc09g007430 No alias Single-stranded DNA binding protein (AHRD V3.3 *** D7KGI0_ARALL) 0.03 Orthogroups_2024-Update
Sopen09g027630 No alias Single-strand binding protein family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0032780 negative regulation of ATPase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0042030 ATPase inhibitor activity IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043462 regulation of ATPase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 74 167
No external refs found!