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  5. At1g31430

At1g31430


Description : Pentatricopeptide repeat-containing protein At1g31430 [Source:UniProtKB/Swiss-Prot;Acc:Q9C866]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g31430
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
101239 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
109283 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
82024 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g47170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g59950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.G01478.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H03084.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02594.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G332843 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G250600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G063370.1 No alias RNA editing factor *(MEF32) 0.03 Orthogroups_2024-Update
LOC_Os05g30710 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001035-RA No alias (at1g16480 : 699.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00001463-RA No alias (at4g33170 : 587.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00016965-RA No alias (at1g11290 : 683.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
PSME_00048766-RA No alias (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Potri.016G065500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G215700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G272500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G161100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g082870 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc05g006800 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
CC GO:0061617 MICOS complex IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 363 485
IPR002885 Pentatricopeptide_repeat 242 290
IPR002885 Pentatricopeptide_repeat 489 516
IPR002885 Pentatricopeptide_repeat 215 238
IPR002885 Pentatricopeptide_repeat 318 343
IPR002885 Pentatricopeptide_repeat 85 111
IPR002885 Pentatricopeptide_repeat 113 140
IPR002885 Pentatricopeptide_repeat 186 213
No external refs found!