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  5. GRMZM2G129034

GRMZM2G129034


Description : K-box region and MADS-box transcription factor family protein


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G129034
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_23145 No alias mads-box protein soc1 0.03 Orthogroups_2024-Update
Bradi4g06867 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.D02091.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00310.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03959.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G099522 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.01 Orthogroups_2024-Update
Glyma.08G034200 No alias AGAMOUS-like 29 0.02 Orthogroups_2024-Update
LOC_Os01g66290 No alias OsMADS21 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52410 No alias OsMADS31 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g30810 No alias OsMADS75 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38590 No alias OsMADS62 - MADS-box family gene with MIKC* type-box, expressed 0.02 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.03 Orthogroups_2024-Update
Sobic.004G281000.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.03 Orthogroups_2024-Update
Solyc05g015730 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002487 TF_Kbox 176 263
IPR002100 TF_MADSbox 99 146
No external refs found!