GRMZM2G130121

Description : casein lytic proteinase B3

Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G130121
Cluster	HCCA clusters: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03613	No alias	chaperone protein clpb1	0.02	Orthogroups_2024-Update
At5g51070	No alias	Chaperone protein ClpD, chloroplastic...	0.02	Orthogroups_2024-Update
Cre11.g467575	No alias	casein lytic proteinase B3	0.01	Orthogroups_2024-Update
Glyma.04G062200	No alias	casein lytic proteinase B4	0.02	Orthogroups_2024-Update
PSME_00000131-RA	No alias	(at5g50920 : 1361.0) Encodes a protein that is similar...	0.02	Orthogroups_2024-Update
Potri.012G112000	No alias	Clp ATPase	0.04	Orthogroups_2024-Update
Potri.015G056900	No alias	heat shock protein 101	0.03	Orthogroups_2024-Update
Potri.015G110000	No alias	Clp ATPase	0.02	Orthogroups_2024-Update
Seita.1G177700.1	No alias	chaperone component *(ClpD) of chloroplast Clp-type...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008198	ferrous iron binding	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	359	527
IPR019489	Clp_ATPase_C	534	612
IPR003959	ATPase_AAA_core	8	95

External Links

No external refs found!