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  5. GRMZM2G130224

GRMZM2G130224


Description : Restriction endonuclease, type II-like superfamily protein


Gene families : OG_42_0001890 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G130224
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
At1g67660 No alias Restriction endonuclease, type II-like superfamily... 0.04 Orthogroups_2024-Update
Potri.010G054800 No alias Restriction endonuclease, type II-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G144000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G126400.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019080 YqaJ_viral_recombinase 156 297
No external refs found!