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GRMZM2G130239


Description : PIF / Ping-Pong family of plant transposases


Gene families : OG_42_0000772 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G130239
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_30397 No alias hypothetical protein 0.04 Orthogroups_2024-Update
GRMZM2G037015 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os01g40070 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g47650 No alias trp repressor/replication initiator, putative, expressed 0.02 Orthogroups_2024-Update
Solyc01g107920 No alias LOW QUALITY:Harbinger transposase-derived nuclease (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 176 340
No external refs found!