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  5. GRMZM2G132169

GRMZM2G132169


Description : laccase 12


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G132169
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
230356 No alias laccase 12 0.03 Orthogroups_2024-Update
A4A49_00457 No alias laccase-3 0.04 Orthogroups_2024-Update
At1g18140 No alias Laccase-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMS3] 0.04 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.02 Orthogroups_2024-Update
Seita.3G218000.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Seita.8G252500.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 421 554
IPR011707 Cu-oxidase_3 36 150
IPR001117 Cu-oxidase 162 312
No external refs found!