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  5. GRMZM2G133646

GRMZM2G133646


Description : squamosa promoter binding protein-like 1


Gene families : OG_42_0001541 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G133646
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At2g47070 No alias Squamosa promoter-binding-like protein 1... 0.03 Orthogroups_2024-Update
At3g60030 No alias Uncharacterized protein At3g60030 (Fragment)... 0.02 Orthogroups_2024-Update
Seita.5G030800.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 127 200
No external refs found!