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GRMZM2G133802


Description : beta-6 tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G133802
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
164404 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Bradi3g05010 No alias tubulin beta chain 2 0.04 Orthogroups_2024-Update
Glyma.03G074400 No alias tubulin beta chain 3 0.03 Orthogroups_2024-Update
MA_251404g0010 No alias (q40665|tbb3_orysa : 841.0) Tubulin beta-3 chain (Beta-3... 0.02 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Solyc06g076640 No alias Tubulin beta chain (AHRD V3.3 *** M1CZM0_SOLTU) 0.05 Orthogroups_2024-Update
Solyc10g086760 No alias Tubulin beta chain (AHRD V3.3 *** A0A103XQ61_CYNCS) 0.03 Orthogroups_2024-Update
Sopen03g004550 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!