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  5. GRMZM2G133806

GRMZM2G133806


Description : Lateral organ boundaries (LOB) domain family protein


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G133806
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_25203 No alias lob domain-containing protein 11 0.03 Orthogroups_2024-Update
At1g16530 No alias LOB domain-containing protein 3... 0.02 Orthogroups_2024-Update
At2g40470 No alias LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
Bradi2g53690 No alias LOB domain-containing protein 13 0.03 Orthogroups_2024-Update
Brara.G01383.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Glyma.15G228100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Glyma.20G023400 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
HORVU4Hr1G002480.2 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G084750.2 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g39150 No alias DUF260 domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g60960 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g03160 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g07270 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_113501g0010 No alias (at2g30130 : 200.0) Overexpression/activation tagged... 0.02 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
MA_85817g0010 No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00039447-RA No alias (at2g28500 : 163.0) LOB domain-containing protein 11... 0.01 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.05 Orthogroups_2024-Update
Potri.001G081400 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Potri.001G196400 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g048740 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g045530 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g016910 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update
Sopen11g030110 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update
Sopen12g034780 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 33 129
No external refs found!