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  5. GRMZM2G134109

GRMZM2G134109


Description : Ribosomal protein S21e


Gene families : OG_42_0002517 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G134109
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
271040 No alias Ribosomal protein S21e 0.06 Orthogroups_2024-Update
At5g27700 No alias 40S ribosomal protein S21... 0.03 Orthogroups_2024-Update
Bradi1g62691 No alias Ribosomal protein S21e 0.06 Orthogroups_2024-Update
Brara.D00506.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.F02849.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.I03670.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Cre03.g203450 No alias Ribosomal protein S21e 0.01 Orthogroups_2024-Update
Glyma.09G045000 No alias Ribosomal protein S21e 0.03 Orthogroups_2024-Update
Glyma.15G147700 No alias Ribosomal protein S21e 0.07 Orthogroups_2024-Update
MA_21647g0010 No alias (at5g27700 : 150.0) Ribosomal protein S21e ; FUNCTIONS... 0.08 Orthogroups_2024-Update
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.03 Orthogroups_2024-Update
PSME_00047574-RA No alias (at5g27700 : 115.0) Ribosomal protein S21e ; FUNCTIONS... 0.05 Orthogroups_2024-Update
Potri.005G026000 No alias Ribosomal protein S21e 0.04 Orthogroups_2024-Update
Potri.013G017600 No alias Ribosomal protein S21e 0.03 Orthogroups_2024-Update
Pp1s306_29V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s372_10V6 No alias 40s ribosomal protein 0.14 Orthogroups_2024-Update
Pp1s73_165V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Sobic.001G130301.1 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.001G374700.2 No alias component *(eS21) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
Solyc01g066840 No alias 40S ribosomal protein S21 (AHRD V3.3 *** A0A0V0GU27_SOLCH) 0.09 Orthogroups_2024-Update
Sopen01g028440 No alias Ribosomal protein S21e 0.07 Orthogroups_2024-Update
evm.model.contig_2342.3 No alias (p35687|rs21_orysa : 96.3) 40S ribosomal protein S21 -... 0.14 Orthogroups_2024-Update
evm.model.tig00020780.14 No alias (at5g27700 : 110.0) Ribosomal protein S21e ; FUNCTIONS... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!