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  5. GRMZM2G134313

GRMZM2G134313


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_42_0006324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G134313
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Bradi4g16810 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
evm.model.tig00000254.7 No alias (at5g63860 : 113.0) UV-B-specific signaling component... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 188 246
IPR000408 Reg_chr_condens 368 410
IPR000408 Reg_chr_condens 297 347
IPR000408 Reg_chr_condens 82 131
IPR000408 Reg_chr_condens 134 185
IPR000408 Reg_chr_condens 33 79
No external refs found!