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  5. GRMZM2G135978

GRMZM2G135978


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G135978
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At2g39940 No alias Coronatine-insensitive protein 1... 0.03 Orthogroups_2024-Update
Bradi4g18220 No alias auxin signaling F-box 3 0.03 Orthogroups_2024-Update
Brara.B03253.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G073230.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
MA_78902g0010 No alias (at5g49980 : 364.0) auxin F-box protein 5 (AFB5);... 0.02 Orthogroups_2024-Update
PSME_00024313-RA No alias (at5g49980 : 738.0) auxin F-box protein 5 (AFB5);... 0.02 Orthogroups_2024-Update
Seita.5G385200.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Sobic.003G359600.1 No alias component *(COI) of jasmonic acid receptor complex 0.05 Orthogroups_2024-Update
Sobic.009G157200.1 No alias component *(COI) of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
Solyc05g009260 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 (AHRD V3.3 *-* TIR1_ARATH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 166 181
No external refs found!