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At1g33350


Description : Pentatricopeptide repeat-containing protein At1g33350 [Source:UniProtKB/Swiss-Prot;Acc:Q9C501]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g33350
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G277600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
MA_42352g0010 No alias (at2g13600 : 487.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_778985g0010 No alias (at2g27610 : 621.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
PSME_00001413-RA No alias (at4g18750 : 525.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
PSME_00013107-RA No alias (at4g13650 : 657.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00051746-RA No alias (at3g03580 : 720.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Seita.9G489500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G088200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc02g080350 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc11g040060 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g033370 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen02g039140 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen03g034990 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen07g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen11g001900 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 191 224
IPR002885 Pentatricopeptide_repeat 299 320
IPR002885 Pentatricopeptide_repeat 226 252
IPR002885 Pentatricopeptide_repeat 402 428
No external refs found!