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GRMZM2G139872


Description : F-box family protein


Gene families : OG_42_0001322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G139872
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g01760 No alias F-box/LRR domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
Seita.3G339100.1 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 195 218
IPR001611 Leu-rich_rpt 170 193
IPR001611 Leu-rich_rpt 401 423
No external refs found!