Description : RING-H2 finger protein ATL58 [Source:UniProtKB/Swiss-Prot;Acc:Q570X5]
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At1g33480 | |
Cluster | HCCA clusters: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g20823 | No alias | RING-H2 finger protein ATL80... | 0.03 | Orthogroups_2024-Update | |
At1g49200 | No alias | RING-H2 finger protein ATL75... | 0.03 | Orthogroups_2024-Update | |
At3g10910 | No alias | RING-H2 finger protein ATL72... | 0.04 | Orthogroups_2024-Update | |
At5g10380 | No alias | E3 ubiquitin-protein ligase RING1... | 0.04 | Orthogroups_2024-Update | |
Bradi1g15627 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi1g60390 | No alias | hypoxia-responsive family protein / zinc finger... | 0.04 | Orthogroups_2024-Update | |
Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi3g46040 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi4g32634 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g44454 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
Brara.F01484.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.H00897.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.I04147.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
GRMZM2G050774 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G171277 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.06G015200 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G082740.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G042940.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
LOC_Os06g09310 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os06g34870 | No alias | Zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10436208g0010 | No alias | (at1g72200 : 100.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_26001g0020 | No alias | (at1g72310 : 117.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
MA_43543g0010 | No alias | (at3g16720 : 107.0) RING-H2 protein induced after... | 0.04 | Orthogroups_2024-Update | |
MA_80729g0030 | No alias | (at3g16720 : 139.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
MA_8693914g0010 | No alias | (at5g05280 : 130.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_9143538g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
MA_9515738g0010 | No alias | (at5g17600 : 145.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
Potri.005G036800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.013G073500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s102_105V6 | No alias | ring finger | 0.03 | Orthogroups_2024-Update | |
Pp1s185_137V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Pp1s71_157V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.03 | Orthogroups_2024-Update | |
Sobic.003G339400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.010G231400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.05 | Orthogroups_2024-Update | |
Sopen03g034470 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
Sopen06g017190 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
CC | GO:0005856 | cytoskeleton | IEP | Predicted GO |
CC | GO:0005885 | Arp2/3 protein complex | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0007015 | actin filament organization | IEP | Predicted GO |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Predicted GO |
CC | GO:0015629 | actin cytoskeleton | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0030832 | regulation of actin filament length | IEP | Predicted GO |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Predicted GO |
BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Predicted GO |
BP | GO:0032271 | regulation of protein polymerization | IEP | Predicted GO |
BP | GO:0032273 | positive regulation of protein polymerization | IEP | Predicted GO |
BP | GO:0032535 | regulation of cellular component size | IEP | Predicted GO |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Predicted GO |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Predicted GO |
BP | GO:0033043 | regulation of organelle organization | IEP | Predicted GO |
BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Predicted GO |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Predicted GO |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
BP | GO:0045010 | actin nucleation | IEP | Predicted GO |
BP | GO:0048518 | positive regulation of biological process | IEP | Predicted GO |
BP | GO:0048522 | positive regulation of cellular process | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Predicted GO |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Predicted GO |
BP | GO:0097435 | supramolecular fiber organization | IEP | Predicted GO |
BP | GO:0110053 | regulation of actin filament organization | IEP | Predicted GO |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Predicted GO |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 99 | 142 |
No external refs found! |