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  5. GRMZM2G142456

GRMZM2G142456


Description : Function unknown


Gene families : OG_42_0001470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G142456
Cluster HCCA clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
A4A49_17288 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g22450 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 Orthogroups_2024-Update
Bradi2g28900 No alias Function unknown 0.06 Orthogroups_2024-Update
Bradi2g61842 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.11G183800 No alias Function unknown 0.02 Orthogroups_2024-Update
MA_107341g0010 No alias (at4g29790 : 417.0) unknown protein; BEST Arabidopsis... 0.02 Orthogroups_2024-Update
Mp1g06630.1 No alias component ADA3 of SAGA transcription co-activator complex 0.04 Orthogroups_2024-Update
Potri.009G164400 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.3G069600.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.04 Orthogroups_2024-Update
Sobic.003G422500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
Sobic.009G005500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
Solyc07g040980 No alias Serine/arginine repetitive matrix protein 2 isoform 2... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!