1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g031870

Solyc03g031870


Description : CoA ligase (AHRD V3.3 *** A0A0K9NMT8_ZOSMR)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g031870
Cluster HCCA clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
PSME_00023564-RA No alias (at5g16370 : 562.0) acyl activating enzyme 5 (AAE5);... 0.02 Orthogroups_2024-Update
Potri.006G036300 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Potri.013G096200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 22 445
IPR025110 AMP-bd_C 454 529
No external refs found!