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At1g34030


Description : 40S ribosomal protein S18 [Source:UniProtKB/Swiss-Prot;Acc:P34788]


Gene families : OG_42_0001811 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g34030
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
267619 No alias S18 ribosomal protein 0.05 Orthogroups_2024-Update
Bradi1g05670 No alias Ribosomal protein S13/S18 family 0.04 Orthogroups_2024-Update
Cre06.g272950 No alias Ribosomal protein S13/S18 family 0.02 Orthogroups_2024-Update
GRMZM2G130544 No alias Ribosomal protein S13/S18 family 0.03 Orthogroups_2024-Update
Glyma.10G221600 No alias Ribosomal protein S13/S18 family 0.03 Orthogroups_2024-Update
Glyma.20G167600 No alias S18 ribosomal protein 0.04 Orthogroups_2024-Update
Kfl00001_0620 kfl00001_0620_v1.1 (at4g09800 : 247.0) encodes a ribosomal protein S18C, a... 0.03 Orthogroups_2024-Update
Mp5g02820.1 No alias component RPS18 of SSU proteome 0.02 Orthogroups_2024-Update
Potri.002G051300 No alias Ribosomal protein S13/S18 family 0.05 Orthogroups_2024-Update
Potri.005G211200 No alias Ribosomal protein S13/S18 family 0.04 Orthogroups_2024-Update
Pp1s14_433V6 No alias 40s ribosomal protein s18 0.05 Orthogroups_2024-Update
Pp1s215_71V6 No alias 40s ribosomal protein s18 0.02 Orthogroups_2024-Update
Pp1s215_81V6 No alias 40s ribosomal protein s18 0.03 Orthogroups_2024-Update
Seita.2G048400.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G049300.1 No alias component *(uS13) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sopen03g021040 No alias Ribosomal protein S13/S18 0.03 Orthogroups_2024-Update
evm.model.contig_2176.2 No alias (at4g09800 : 195.0) encodes a ribosomal protein S18C, a... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098799 outer mitochondrial membrane protein complex IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!