GRMZM2G143646

Description : Pentatricopeptide repeat (PPR-like) superfamily protein

Gene families : OG_42_0009417 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009417_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G143646
Cluster	HCCA clusters: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_65500g0010	No alias	(at1g08070 : 616.0) Encodes a chloroplast RNA editing...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0008299	isoprenoid biosynthetic process	IEA	InterProScan predictions
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	478	504
IPR002885	Pentatricopeptide_repeat	407	437
IPR002885	Pentatricopeptide_repeat	379	406
IPR002885	Pentatricopeptide_repeat	650	674
IPR002885	Pentatricopeptide_repeat	442	472
IPR002885	Pentatricopeptide_repeat	237	265
IPR002885	Pentatricopeptide_repeat	132	161
IPR002885	Pentatricopeptide_repeat	550	571
IPR002885	Pentatricopeptide_repeat	268	316
IPR002885	Pentatricopeptide_repeat	576	622
IPR000092	Polyprenyl_synt	902	962
IPR032867	DYW_dom	754	866

External Links

No external refs found!