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  5. GRMZM2G143747

GRMZM2G143747


Description : glycosyl hydrolase 9C2


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G143747
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
85183 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Bradi1g54580 No alias cellulase 2 0.03 Orthogroups_2024-Update
Glyma.06G056700 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Glyma.14G019900 No alias glycosyl hydrolase 9B8 0.04 Orthogroups_2024-Update
HORVU6Hr1G073570.3 No alias class-B endo-1,4-beta-glucanase 0.05 Orthogroups_2024-Update
HORVU7Hr1G075970.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g57860 No alias endoglucanase precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.04 Orthogroups_2024-Update
PSME_00007066-RA No alias (at1g02800 : 663.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00027441-RA No alias (at4g11050 : 477.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
PSME_00036149-RA No alias (q652f9|gun17_orysa : 587.0) Endoglucanase 17 precursor... 0.02 Orthogroups_2024-Update
PSME_00040941-RA No alias (p22503|gun_phavu : 470.0) Endoglucanase precursor (EC... 0.05 Orthogroups_2024-Update
Potri.001G356000 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 29 492
IPR019028 CBM_49 531 608
No external refs found!