1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G144172

GRMZM2G144172


Description : OBF-binding protein 3


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G144172
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
At2g34140 No alias Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] 0.03 Orthogroups_2024-Update
At3g55370 No alias OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4] 0.04 Orthogroups_2024-Update
Bradi2g62380 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Brara.B03736.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.06G131500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.07G012100 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Glyma.12G072400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G177600 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.15G039300 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.15G215500 No alias cycling DOF factor 1 0.04 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_83624g0010 No alias (at5g60200 : 114.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
Potri.005G149100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Seita.1G303300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.3G371900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g078620 No alias Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA) 0.03 Orthogroups_2024-Update
Solyc03g112930 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Solyc06g062520 No alias Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA) 0.03 Orthogroups_2024-Update
Sopen11g030150 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 118 172
No external refs found!