1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g34160

At1g34160


Description : Pentatricopeptide repeat-containing protein At1g34160 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX24]


Gene families : OG_42_0010081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g34160
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Bradi1g45290 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.I02452.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 369
IPR002885 Pentatricopeptide_repeat 147 173
IPR002885 Pentatricopeptide_repeat 177 206
IPR002885 Pentatricopeptide_repeat 71 96
IPR002885 Pentatricopeptide_repeat 245 266
IPR032867 DYW_dom 444 571
IPR002885 Pentatricopeptide_repeat 271 318
No external refs found!