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GRMZM2G145300


Description : TRAF-like superfamily protein


Gene families : OG_42_0002099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G145300
Cluster HCCA clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
A4A49_15593 No alias math domain-containing protein 0.03 Orthogroups_2024-Update
Bradi2g51517 No alias TRAF-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g02725 No alias TRAF-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G016250.1 No alias endomembrane trafficking ATG6-stability regulator... 0.03 Orthogroups_2024-Update
Seita.3G375900.1 No alias endomembrane trafficking ATG6-stability regulator... 0.03 Orthogroups_2024-Update
Seita.5G337300.1 No alias endomembrane trafficking ATG6-stability regulator... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 82 199
No external refs found!