1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G145518

GRMZM2G145518


Description : basic chitinase


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G145518
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
PSME_00012567-RA No alias (p51613|chib_vitvi : 374.0) Basic endochitinase... 0.03 Orthogroups_2024-Update
Potri.004G182100 No alias basic chitinase 0.03 Orthogroups_2024-Update
Pp1s134_173V6 No alias chitinase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 122 355
IPR001002 Chitin-bd_1 62 99
No external refs found!