At1g34410

Description : Putative auxin response factor 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8N9]

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g34410
Cluster	HCCA clusters: Cluster_213

Target	Alias	Description	ECC score	Gene Family Method
181406	No alias	auxin response factor 8	0.03	Orthogroups_2024-Update
A4A49_30370	No alias	auxin response factor 11	0.02	Orthogroups_2024-Update
At1g34310	No alias	Auxin response factor 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID4]	0.04	Orthogroups_2024-Update
Bradi3g28950	No alias	auxin response factor 16	0.02	Orthogroups_2024-Update
Brara.E00126.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F01415.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.G02126.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G006042	No alias	auxin response factor 2	0.03	Orthogroups_2024-Update
GRMZM2G153233	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
GRMZM2G475882	No alias	auxin response factor 6	0.03	Orthogroups_2024-Update
Glyma.07G202200	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
HORVU2Hr1G125740.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g70270	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g09660	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00016596-RA	No alias	(at5g62000 : 344.0) Encodes an auxin response factor....	0.03	Orthogroups_2024-Update
Potri.002G207050	No alias	auxin response factor 2	0.03	Orthogroups_2024-Update
Seita.3G020000.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G438100.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G108100.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G262100.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G073600.1	No alias	ARF-type transcription factor & auxin signal mediator...	0.02	Orthogroups_2024-Update
Solyc08g008380	No alias	Auxin Response Factor 9B	0.03	Orthogroups_2024-Update
Solyc11g013470	No alias	No description available	0.03	Orthogroups_2024-Update
Sopen08g030870	No alias	Auxin response factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0000075	cell cycle checkpoint	IEP	Predicted GO
BP	GO:0000077	DNA damage checkpoint	IEP	Predicted GO
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predicted GO
MF	GO:0004620	phospholipase activity	IEP	Predicted GO
MF	GO:0004629	phospholipase C activity	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005811	lipid droplet	IEP	Predicted GO
BP	GO:0006020	inositol metabolic process	IEP	Predicted GO
BP	GO:0006066	alcohol metabolic process	IEP	Predicted GO
BP	GO:0006606	protein import into nucleus	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
BP	GO:0019310	inositol catabolic process	IEP	Predicted GO
BP	GO:0019751	polyol metabolic process	IEP	Predicted GO
CC	GO:0030896	checkpoint clamp complex	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0031570	DNA integrity checkpoint	IEP	Predicted GO
BP	GO:0034504	protein localization to nucleus	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Predicted GO
CC	GO:0044454	nuclear chromosome part	IEP	Predicted GO
BP	GO:0045786	negative regulation of cell cycle	IEP	Predicted GO
BP	GO:0046164	alcohol catabolic process	IEP	Predicted GO
BP	GO:0046174	polyol catabolic process	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0050113	inositol oxygenase activity	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051170	import into nucleus	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predicted GO
MF	GO:0140104	molecular carrier activity	IEP	Predicted GO
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predicted GO
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predicted GO
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	126	227
IPR010525	Auxin_resp	252	330
IPR033389	AUX/IAA_dom	506	547

External Links

No external refs found!

At1g34410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation