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  5. Solyc03g031920

Solyc03g031920


Description : Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g031920
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_27452 No alias metal-nicotianamine transporter ysl3 0.03 Orthogroups_2024-Update
Bradi3g50260 No alias YELLOW STRIPE like 3 0.03 Orthogroups_2024-Update
GRMZM5G893444 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
Glyma.09G164500 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
HORVU2Hr1G120250.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.02 Orthogroups_2024-Update
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Orthogroups_2024-Update
PSME_00016947-RA No alias (at1g65730 : 884.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00019280-RA No alias (at5g53550 : 798.0) YELLOW STRIPE like 3 (YSL3);... 0.03 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00044922-RA No alias (at1g65730 : 907.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.001G084400 No alias YELLOW STRIPE like 1 0.04 Orthogroups_2024-Update
Potri.017G151101 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.03 Orthogroups_2024-Update
Seita.1G244400.1 iew ECC pair as graph"> No alias iron chelator transporter *(YSL) & ferric... 0.05 Orthogroups_2024-Update
Seita.1G254200.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 45 665
No external refs found!