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At1g34575


Description : Berberine bridge enzyme-like 14 [Source:UniProtKB/Swiss-Prot;Acc:F4HV09]


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g34575
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At1g30710 No alias Berberine bridge enzyme-like 9... 0.03 Orthogroups_2024-Update
Bradi1g38270 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.I03596.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.08 Orthogroups_2024-Update
Glyma.10G177100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Kfl00307_0010 kfl00307_0010_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
Seita.6G216800.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 467 522
IPR006094 Oxid_FAD_bind_N 79 215
No external refs found!