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GRMZM2G147243


Description : phytochrome-associated protein 2


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G147243
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
A4A49_02561 No alias auxin-responsive protein iaa27 0.02 Orthogroups_2024-Update
Brara.I05502.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
HORVU6Hr1G091260.4 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os02g57250 No alias OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
Sopen06g018970 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g027640 No alias AUX/IAA family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 28 235
No external refs found!