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  5. Solyc03g031940

Solyc03g031940


Description : AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT1G21540.1)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g031940
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
409095 No alias acyl activating enzyme 1 0.02 Orthogroups_2024-Update
A4A49_13610 No alias butyrate--coa ligase aae11, peroxisomal 0.05 Orthogroups_2024-Update
A4A49_16169 No alias acetatebutyrate--coa ligase aae7, peroxisomal 0.03 Orthogroups_2024-Update
A4A49_22955 No alias putative acyl-activating enzyme 6 0.03 Orthogroups_2024-Update
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.02 Orthogroups_2024-Update
Glyma.11G014900 No alias acyl activating enzyme 1 0.04 Orthogroups_2024-Update
Glyma.17G031800 No alias acyl-activating enzyme 7 0.03 Orthogroups_2024-Update
LOC_Os03g03790 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00040387-RA No alias (at3g16910 : 749.0) Encodes a peroxisomal protein with... 0.02 Orthogroups_2024-Update
PSME_00047097-RA No alias (at3g16910 : 749.0) Encodes a peroxisomal protein with... 0.03 Orthogroups_2024-Update
Pp1s220_60V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Pp1s7_313V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Seita.3G017400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G554000.1 No alias benzoyl-CoA ligase *(BZO1) 0.03 Orthogroups_2024-Update
Solyc07g043650 No alias CoA ligase (AHRD V3.3 *** A0A0K9NMT8_ZOSMR) 0.02 Orthogroups_2024-Update
Sopen02g026000 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update
Sopen03g005800 No alias AMP-binding enzyme 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 526 602
IPR000873 AMP-dep_Synth/Lig 99 517
No external refs found!