- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RING/U-box superfamily protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G150832 | |
| Cluster | HCCA clusters: Cluster_160 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 39820 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 8844 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g53820 | No alias | RING-H2 finger protein ATL60... | 0.03 | Orthogroups_2024-Update | |
| Brara.A03822.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Brara.E00933.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I03307.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G029910.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g11460 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g08200 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g33720 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_114175g0010 | No alias | (at3g16720 : 124.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_19072g0010 | No alias | (at5g17600 : 137.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00003015-RA | No alias | (at3g05200 : 122.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
| Potri.014G043200 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.4G172100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G092200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.009G110200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.009G110400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sopen12g029870 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006308 | DNA catabolic process | IEP | Predicted GO |
| BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
| BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 90 | 135 |
| No external refs found! |