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  5. GRMZM2G151204

GRMZM2G151204


Description : CYS, MET, PRO, and GLY protein 1


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G151204
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
416356 No alias plant U-box 24 0.02 Orthogroups_2024-Update
Bradi1g44390 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g09777 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Glyma.02G083900 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G102900 No alias plant U-box 26 0.03 Orthogroups_2024-Update
Glyma.03G202600 No alias plant U-box 22 0.05 Orthogroups_2024-Update
Glyma.10G081900 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Glyma.10G262600 No alias plant U-box 22 0.02 Orthogroups_2024-Update
HORVU2Hr1G076470.1 No alias Unknown function 0.08 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
HORVU6Hr1G089590.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os02g33590 No alias U-box domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g30330 No alias U-box domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_33190g0010 No alias (at2g35930 : 324.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
MA_83739g0020 No alias (at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00046041-RA No alias "(at5g64660 : 307.0) ""CYS, MET, PRO, and GLY protein... 0.05 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.06 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.04 Orthogroups_2024-Update
Potri.005G189800 No alias plant U-box 29 0.02 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G137700 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G016100 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G104100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G474100.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G245100.1 No alias E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 67 138
No external refs found!