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  5. GRMZM2G154218

GRMZM2G154218


Description : GTP binding Elongation factor Tu family protein


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G154218
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
171512 No alias GTP binding Elongation factor Tu family protein 0.03 Orthogroups_2024-Update
Bradi0012s00100 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Bradi1g06851 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Bradi1g06870 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Bradi1g65725 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Brara.B01038.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.B01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Brara.C01040.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Brara.E01218.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.I05330.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Brara.I05331.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
GRMZM2G151193 No alias GTP binding Elongation factor Tu family protein 0.03 Orthogroups_2024-Update
Glyma.05G089000 No alias GTP binding Elongation factor Tu family protein 0.04 Orthogroups_2024-Update
Glyma.05G114900 No alias GTP binding Elongation factor Tu family protein 0.05 Orthogroups_2024-Update
Glyma.16G068000 No alias GTP binding Elongation factor Tu family protein 0.03 Orthogroups_2024-Update
Glyma.17G186600 No alias GTP binding Elongation factor Tu family protein 0.03 Orthogroups_2024-Update
Glyma.19G052400 No alias GTP binding Elongation factor Tu family protein 0.06 Orthogroups_2024-Update
HORVU0Hr1G017020.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
HORVU5Hr1G100700.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
MA_434977g0010 No alias (p25698|ef1a_soybn : 756.0) Elongation factor 1-alpha... 0.03 Orthogroups_2024-Update
Mp6g18140.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Orthogroups_2024-Update
Pp1s7_445V6 No alias elongation factor 1- 0.04 Orthogroups_2024-Update
Seita.3G265400.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Seita.3G265600.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Seita.3G265700.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.05 Orthogroups_2024-Update
Seita.9G442900.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Seita.9G443000.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Sobic.010G182200.2 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.04 Orthogroups_2024-Update
Sobic.010G182300.1 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.03 Orthogroups_2024-Update
Sobic.010G182600.4 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Sopen06g004650 No alias Elongation factor Tu GTP binding domain 0.03 Orthogroups_2024-Update
Sopen11g027830 No alias Elongation factor Tu GTP binding domain 0.02 Orthogroups_2024-Update
evm.model.contig_509.2 No alias (p25698|ef1a_soybn : 335.0) Elongation factor 1-alpha... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR004161 EFTu-like_2 248 313
IPR000795 TF_GTP-bd_dom 5 223
No external refs found!