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GRMZM2G155980


Description : FAR1-related sequence 6


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G155980
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G022720.2 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G022760.2 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G055740.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G055990.3 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G016300.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sopen07g022850 No alias FAR1 DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 310 400
IPR007527 Znf_SWIM 603 622
IPR004330 FAR1_DNA_bnd_dom 122 206
No external refs found!