At1g42540

Description : Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g42540
Cluster	HCCA clusters: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37064	No alias	glutamate receptor 3.2	0.02	Orthogroups_2024-Update
Bradi1g59600	No alias	glutamate receptor 3.4	0.02	Orthogroups_2024-Update
Bradi4g30840	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Brara.G00725.1	No alias	ligand-gated cation channel *(GLR)	0.04	Orthogroups_2024-Update
Brara.H00536.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Glyma.01G157900	No alias	glutamate receptor 3.6	0.03	Orthogroups_2024-Update
Glyma.02G311466	No alias	glutamate receptor 2	0.02	Orthogroups_2024-Update
Glyma.04G016000	No alias	glutamate receptor 3.3	0.03	Orthogroups_2024-Update
Glyma.07G226400	No alias	glutamate receptor 2.8	0.04	Orthogroups_2024-Update
Glyma.12G194100	No alias	glutamate receptor 5	0.03	Orthogroups_2024-Update
HORVU5Hr1G063430.8	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
HORVU5Hr1G063510.2	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
HORVU6Hr1G083570.16	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
LOC_Os02g54640	No alias	glutamate receptor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00050642-RA	No alias	(q7xp59\|glr31_orysa : 567.0) Glutamate receptor 3.1...	0.03	Orthogroups_2024-Update
Potri.014G152200	No alias	glutamate receptor 3.4	0.04	Orthogroups_2024-Update
Seita.4G260500.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sobic.006G193200.3	No alias	ligand-gated cation channel *(GLR)	0.06	Orthogroups_2024-Update
Sobic.010G231500.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Solyc04g082610	No alias	glutamate receptor like 3.3	0.02	Orthogroups_2024-Update
Sopen07g026030	No alias	Receptor family ligand binding region	0.05	Orthogroups_2024-Update
evm.model.contig_3514.1	No alias	(at4g35290 : 111.0) Encodes a putative glutamate...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004602	glutathione peroxidase activity	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030410	nicotianamine synthase activity	IEP	Predicted GO
BP	GO:0030417	nicotianamine metabolic process	IEP	Predicted GO
BP	GO:0030418	nicotianamine biosynthetic process	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	485	807
IPR001828	ANF_lig-bd_rcpt	47	405
IPR001320	Iontro_rcpt	808	840

External Links

No external refs found!

At1g42540

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation