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  5. GRMZM2G158452

GRMZM2G158452


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0007642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G158452
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
At2g41720 No alias EMB2654 [Source:UniProtKB/TrEMBL;Acc:A0A178VXZ9] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032958 inositol phosphate biosynthetic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 186 233
IPR002885 Pentatricopeptide_repeat 291 334
IPR002885 Pentatricopeptide_repeat 577 620
IPR002885 Pentatricopeptide_repeat 504 552
IPR002885 Pentatricopeptide_repeat 456 494
IPR002885 Pentatricopeptide_repeat 632 690
IPR002885 Pentatricopeptide_repeat 749 792
IPR002885 Pentatricopeptide_repeat 391 446
IPR002885 Pentatricopeptide_repeat 155 184
IPR002885 Pentatricopeptide_repeat 717 743
No external refs found!