1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. GRMZM2G159250

GRMZM2G159250


Description : ribosome recycling factor, chloroplast precursor


Gene families : OG_42_0006816 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006816_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G159250
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
At3g63190 No alias Ribosome-recycling factor, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g24110 No alias ribosome recycling factor, chloroplast precursor 0.02 Orthogroups_2024-Update
Brara.I04373.1 No alias translation ribosome recycling factor *(RRF) 0.03 Orthogroups_2024-Update
Kfl00032_0150 kfl00032_0150_v1.1 "(p82231|rrfc_spiol : 224.0) Ribosome recycling factor,... 0.02 Orthogroups_2024-Update
Potri.002G052400 No alias ribosome recycling factor, chloroplast precursor 0.03 Orthogroups_2024-Update
Seita.6G013200.1 No alias translation ribosome recycling factor *(RRF) 0.04 Orthogroups_2024-Update
Sobic.007G013400.2 No alias translation ribosome recycling factor *(RRF) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 100 262
No external refs found!