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At1g43710


Description : SDC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WA97]


Gene families : OG_42_0001375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g43710
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Brara.E01756.1 No alias serine decarboxylase 0.08 Orthogroups_2024-Update
Glyma.08G181700 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.04 Orthogroups_2024-Update
PSME_00010590-RA No alias (at1g43710 : 549.0) embryo defective 1075 (emb1075);... 0.03 Orthogroups_2024-Update
PSME_00025378-RA No alias (at1g43710 : 407.0) embryo defective 1075 (emb1075);... 0.03 Orthogroups_2024-Update
PSME_00030422-RA No alias (at1g43710 : 473.0) embryo defective 1075 (emb1075);... 0.03 Orthogroups_2024-Update
PSME_00039686-RA No alias (at1g43710 : 449.0) embryo defective 1075 (emb1075);... 0.03 Orthogroups_2024-Update
PSME_00046790-RA No alias (at1g43710 : 751.0) embryo defective 1075 (emb1075);... 0.03 Orthogroups_2024-Update
Sopen04g027090 No alias Pyridoxal-dependent decarboxylase conserved domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA InterProScan predictions
BP GO:0019752 carboxylic acid metabolic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 193 406
No external refs found!