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  5. At1g44110

At1g44110


Description : CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g44110
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.04 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
A4A49_05136 No alias g2mitotic-specific cyclin-1 0.02 Orthogroups_2024-Update
A4A49_12698 No alias cyclin-a1-3 0.05 Orthogroups_2024-Update
A4A49_35953 No alias g2mitotic-specific cyclin s13-6 0.06 Orthogroups_2024-Update
A4A49_40931 No alias g2mitotic-specific cyclin s13-6 0.03 Orthogroups_2024-Update
At1g47230 No alias Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2] 0.03 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.1 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.07 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.09 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.09 Orthogroups_2024-Update
Brara.H02508.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01033.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Brara.K00759.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Glyma.01G159700 No alias Cyclin B2;3 0.11 Orthogroups_2024-Update
Glyma.02G277600 No alias Cyclin family protein 0.12 Orthogroups_2024-Update
Glyma.03G123600 No alias Cyclin family protein 0.13 Orthogroups_2024-Update
Glyma.04G001100 No alias Cyclin B2;3 0.08 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.07 Orthogroups_2024-Update
Glyma.06G000600 No alias Cyclin B2;3 0.09 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.08 Orthogroups_2024-Update
Glyma.06G116100 No alias Cyclin A1;1 0.05 Orthogroups_2024-Update
Glyma.07G034100 No alias Cyclin A2;4 0.05 Orthogroups_2024-Update
Glyma.08G234900 No alias cyclin b3;1 0.04 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.04 Orthogroups_2024-Update
Glyma.13G031500 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Glyma.14G037100 No alias Cyclin family protein 0.08 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Glyma.19G127200 No alias Cyclin family protein 0.1 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.06 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.04 Orthogroups_2024-Update
Potri.006G035200 No alias Cyclin family protein 0.03 Orthogroups_2024-Update
Pp1s84_31V6 No alias n-terminal domain containing expressed 0.02 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.1 Orthogroups_2024-Update
Solyc02g082820 No alias cyclin B2 0.08 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.1 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.1 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.04 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.09 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.08 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.11 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.07 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.03 Orthogroups_2024-Update
Sopen01g004530 No alias Cyclin, N-terminal domain 0.1 Orthogroups_2024-Update
Sopen02g027620 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen03g006030 No alias Cyclin, N-terminal domain 0.06 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.11 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen10g028990 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
Sopen10g031460 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen12g030490 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.03 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.01 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 197 323
IPR004367 Cyclin_C-dom 326 445
No external refs found!