1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g032210

Solyc03g032210


Description : AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g032210
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_05963 No alias putative acyl-activating enzyme 2 0.04 Orthogroups_2024-Update
At1g21540 No alias Probable acyl-activating enzyme 9... 0.04 Orthogroups_2024-Update
Sopen02g025990 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 497 571
IPR000873 AMP-dep_Synth/Lig 61 488
No external refs found!