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GRMZM2G164084


Description : RNApolymerase sigma subunit 2


Gene families : OG_42_0001174 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G164084
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Seita.9G461200.1 No alias basal Sigma-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006352 DNA-templated transcription, initiation IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR007627 RNA_pol_sigma70_r2 291 355
IPR007624 RNA_pol_sigma70_r3 370 444
IPR007630 RNA_pol_sigma70_r4 458 510
No external refs found!